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国家高技术研究发展计划(2006AA10Z179)

作品数:17 被引量:75H指数:7
相关作者:郑有良魏育明杜世平陈华萍颜泽洪更多>>
相关机构:四川农业大学成都市环境保护科学研究院中华人民共和国农业部更多>>
发文基金:国家高技术研究发展计划国家自然科学基金教育部“新世纪优秀人才支持计划”更多>>
相关领域:农业科学理学轻工技术与工程生物学更多>>

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17 条 记 录,以下是 1-10
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Analysis of LMW-GS,α-and γ-Gliadin Gene Coding Sequences from Triticum macha被引量:1
2010年
Novel LMW-GS (low molecular weight glutenin subunit), α- and γ-gliadin from Triticum macha accessions were characterized via genomic PCR, which can do favor to improve the wheat quality. The complete coding regions of two α-gliadin, two γ-gliadin and two LMW-GS gene sequences, which designed as Gli-Mal, Gli-Ma2, Gli-Mr1, Gli-Mr2, Glu-LM1 and Glu-LM2, encoded the mature proteins with 307, 241, 348, 302, 474 and 377 amino acid residues, respectively. Gli-Mal and Gli-Ma2 were recognized as pseudogenes due to the in-frame stop codons. The amino acid sequences deduced from these gene sequences were characterized with the typical structure of α- or γ-gliadin or LMW-m type proteins with the exception of Gli-Ma2. Phylogenetic analysis showed Gli-Mal was closely related to those from T. aestivum, whereas Gli-Ma2 seemed to be more homologous with the gene sequences from Dasypyrum breviaristatum. Gli-Mr1 was closely related to those from T. turgidum ssp. dicoccoides, while Gli-Mr2 was the nearest to those from T. aestivum. Glu-LM1 was closely related to those from Aegilops tauschii, whereas Glu-LM2 seemed to be more homologous with those from T. durum.
XIONG Li-juanWANG Ji-ruiZHENG You-liang
关键词:低分子量谷蛋白亚基醇溶蛋白基因小麦品质麦醇溶蛋白
Evaluation on Chinese Bread Wheat Landraces for Low pH and Aluminum Tolerance Using Hydroponic Screening被引量:7
2009年
Aluminum (Al) toxicity often takes place in acidic soils with a pH of 5.5 or lower. Breeding and cultivation of Al tolerance wheat can partially protect wheat escaping from Al toxicity. The scarcity of the tolerant sources impedes the wheat breeding. In order to find new Al tolerance sources, we screened 173 bread wheat landraces from Tibet of China using hydroponic screening. It was indicated that: (1) There were diversities on the root regenerate length (RRL). The RRL of a large of landraces were longer than 7.00 cm in pH 7 (58.38%) and pH 4.5 (66.47%), but shorter than 5.00 cm in pH 4.5 + 50 μM Al3+ (80.93%). The low pH showed either promotion or restraining effects depend on landraces, but Al toxicity under low pH only showed restraining effects on the root elongation. (2) There were also diversities on root tolerance index of low pH (RTI1) or root aluminum tolerance index (RTI2) among cultivars. The RTI1 varied from a narrow range but with relatively high value (0.8722-1.2953) in comparison with that of RTI2 (0.3829-1.0058), and the RTI1 of approximately 60% landraces was higher than 1.0000, the RTI2 of only 19.07% landraces was higher than 0.7000, suggesting that Al toxicity acted as an important factor for the reduction of the root elongation under acidic soils. (3) The RTI1 of many wheats was higher than 1.0000, and As2256 and As2295 were the most tolerant for low pH, with RTI1 1.2953 and 1.2925, respectively. (4) Based on RTI2, seven wheats showed similar or higher tolerance to Al toxicity than Chinese Spring (CS), a known tolerance wheat. Much better tolerance existed in landraces of As1543 and As1242, which can be used as the new parents for Al tolerant breeding.
DAI Shou-fen YAN Ze-hong LIU Deng-cai ZHANG Lian-quan WEI Yu-ming ZHENG You-liang
关键词:面包小麦品种低PH值耐铝性酸性土壤
层次模糊综合评价法在校园环境质量评价中的应用被引量:17
2008年
将模糊数学方法与层次分析相结合,建立基于层次分析的多级模糊综合评价法,并将该方法应用于校园环境质量综合评价,结果表明:该方法较好地反映了环境质量分级界限的模糊性,较好地解决了权值分配问题,使评价结论更合理、可靠,是一种有价值的环境质量综合评价方法。
杜世平汪建马文彬
关键词:层次分析法
小麦品种“川农16”α-醇溶蛋白基因序列分析被引量:8
2008年
【目的】克隆和分析"川农16"醇溶蛋白基因,为其进一步遗传改良提供更多依据。【方法】根据已报道的α-醇溶蛋白基因序列设计引物,对小麦品种"川农16"总DNA进行PCR扩增得到约900bp的DNA片段,分离纯化后连接到pMD18-T载体上,转化后筛选阳性克隆进行测序。【结果】获得4个不同的基因序列:Gli2-CN16-9、Gli2-CN16-12、Gli2-CN16-14和Gli2-CN16-6,GenBank登录号分别为DQ246446、DQ246447、DQ246448和DQ246449。其中,Gli2-CN16-9、Gli2-CN16-12和Gli2-CN16-14分别为861、870和900bp,可分别编码286、289和299个氨基酸残基的成熟蛋白;而Gli2-CN16-6编码区长度为852bp,由于存在2个提前终止密码子,不能编码有功能的成熟蛋白,为假基因。【结论】序列比较显示它们与α-醇溶蛋白基因有很高的一致性;与γ-和ω-醇溶蛋白基因差异明显。
刘千龙海魏育明颜泽洪郑有良
关键词:小麦
带驻留时间隐马尔可夫模型学习算法的改进
2008年
对隐马尔可夫模型(hidden Markov model:HMM)的状态驻留时间的概率进行了修订,给出了改进的带驻留时间隐马尔可夫模型的结构,并在传统的隐马尔可夫模型(traditional hidden Markov model:THMM)的基础上讨论了新模型的前向-后向变量,导出了新模型的前向-后向算法的迭代公式,同时也给出了新模型各个参数的重估公式.
杜世平
关键词:隐马尔可夫模型学习算法
带芒草属低分子量谷蛋白基因的克隆及序列分析被引量:3
2008年
在普通小麦中获得了大量的低分子量谷蛋白基因序列,而在小麦近缘属物种中获得的同源基因则比较少,导致对麦类低分子量谷蛋白基因家族成员间的关系还不清楚。因此,进行近缘属物种低分子量谷蛋白基因的研究是非常必要的。此研究通过特殊设计的1对引物,以小麦近缘属带芒草物种的基因组DNA为模板,经过PCR和克隆,从中得到了一条核苷酸序列长度为1035bp,推测的氨基酸序列为343个氨基酸残基的低分子量谷蛋白基因,该基因序列具有小麦低分子量谷蛋白基因的典型特征,包括21个氨基酸残基的信号肽、13个氨基酸的N-端和由可重复的短肽单元组成的重复区以及1个C末端。序列比对结果揭示了来自带芒草的低分子量谷蛋白基因与小麦同源基因的差异及相互关系。此研究结果对从带芒草属以及其他小麦近缘属物种中分离未知低分子量谷蛋白基因有参考价值和借鉴意义。
曾节代寿芬郑有良刘登才魏育明颜泽洪
关键词:基因克隆
四川小麦地方品种AS1643中低分子量谷蛋白基因的克隆及其蛋白质的二级结构预测被引量:3
2007年
根据小麦低分子量谷蛋白基因保守区序列设计引物P1/P2,采用PCR法对四川小麦地方品种AS1643的基因组DNA进行扩增,获得1条约900bp的片段,分离、纯化后连接到载体pMD18-T上,对筛选阳性克隆测序,获得1个低分子量谷蛋白基因LMW-AS1643(GenBank登录号:EF190322),其编码区长度为909bp,可编码302个氨基酸残基组成的成熟蛋白。序列分析结果表明,LMW-AS1643具有典型的低分子量谷蛋白基因的基本结构,其推导氨基酸序列与其它已知的LMW-GS相比,最高相似性为93.40%。生物信息学分析表明,在LMW-AS1643低分子量谷蛋白中,无规则卷曲含量最高,为67.90%,其次是α-螺旋,占30.46%,β-折叠含量最少,为1.64%。
陈华萍黄乾明魏育明郑有良
关键词:小麦地方品种基因克隆
Genetic Variation in Triticum turgidum L. ssp. turgidum Landraces from China Assessed by EST-SSR Markers被引量:9
2008年
It was helpful for the wheat improvement to evaluate the genetic resources of Triticum turgidum L. ssp. turgidum landraces. In this study,68 turgidum landraces accessions,belonging to four geographic populations in China,were investigated by using EST-SSR markers. A total of 63 alleles were detected on 22 EST-SSR loci,and the number of alleles on each locus ranged from 1 to 5,with an average of 2.9. The results of the analysis of molecular variance (AMOVA) indicated that 92.5% of the total variations was attributed to the genetic variations within population,whereas only 7.5% variations among populations. Although the four populations had similar genetic diversity parameters,Sichuan population was yet distinguished from other populations when comparing the population samples in pairs. Significant correlations were detected by the statistic analysis among six genetic diversity parameters among each other. The selection difference between heterozygosty and homozygosty was also observed among different EST-SSR locus. The genetic similarity (GS) ranged from 0.18 to 0.98,with the mean of 0.72,and all accessions could be clustered into 7 groups. The dendrogram suggested that the genetic relationships among turgidum accessions evaluated by EST-SSR markers were unrelated to their geographic distributions. These results implied that turgidum landraces from China had the unique characters of genetic diversity.
LI WeiDONG PanWEI Yu-mingCHENG Guo-yueZHENG You-liang
关键词:小麦EST-SSR标记
Variations of Single Nucleotide Polymorphism (SNP) of Hordoindoline a Gene (hina) and Its Relationships with Kernel Hardness in 92 North American Barley Varieties (Hordeum vulgare L.)
2009年
Grain texture in barley (Hordeum vulgare L.) is an important quality character.The single nucleotide polymorphisms (SNPs) in Hordoindoline a (hina) gene and its relationship with hardness index among North American barley cultivars were investigated.The hina genes in 36 cultivars were sequenced for the SNP analyses,and 17 sets of SNP primers were designed to detect the SNP variations of hina locus in 92 North American barley cultivars.SNP detection indicated that there were four haplotypes in the hina genes of 92 barley cultivars,and haplotype 01 and 02 were shared by 68 and 14 cultivars,respectively,suggesting that there was a very limited diversity in hina genes among North American barley cultivars.Despite the wide range in hardness exists in 92 barley cultivars,however,unlike wheat,where a clear relationship has been demonstrated between a number of SNPs in the wheat hardness genes and quality (soft or hard wheat),there was no such relationship for barley.The genotypes used in this study demonstrated that there was a low level of polymorphism in hina gene in North American barley cultivars and these polymorphisms had no impact on grain hardness.
CHEN Guo-yueYANG Shi-dongLI Wei-taoLI WeiWEI Yu-mingZHENG You-liang
关键词:大麦品种籽粒硬度SNP优质小麦
西藏普通小麦地方品种特有高分子量谷蛋白亚基组合“Tibetan Dx5*+Tibetan Dy10”中Tibetan Dy10亚基基因测序与分析被引量:3
2007年
【目的】鉴定在西藏小麦地方品种中发现的特有高分子量谷蛋白亚基组合"Tibetan Dx5*+Tibetan Dy10"中的Tibetan Dy10亚基是否与普通小麦Dy10亚基为同一亚基。【方法】利用SDS-PAGE分析和TibetanDy10亚基基因的克隆和测序。【结果】表明Tibetan Dy10亚基与普通小麦中Dy10亚基广泛存在的Dx5+Dy10组合形式中的Dy10亚基的分子序列非常相似,但分别在2个六肽中的1个氨基酸部位发生替换,第335位的甘氨酸(G)和第451位的谷氨酰氨(Q)在Tibetan Dy10中均被替换为精氨酸(R)。【结论】Tibetan Dy10与普通小麦中常见的Dy10亚基基因的DNA序列存在微小差异,属于Dy10位点的一个新变异。
颜泽洪代寿芬刘登才魏育明郑有良
关键词:DNA测序
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