搜索到357篇“ PROMISCUITY“的相关文章
Molecular characterization and structure basis of a malonyltransferase with both substrate promiscuity and catalytic regiospecificity from Cistanche tubulosa
2024年
Enzymatic malonylation of natural glycosides provides a promising alternative method for drug-like malonylated glycosides supply.However,the catalytic potential and structural basis of plant malonyltransferase are far from being fully elucidated.This work identified a new malonyltransferase CtMaT1 from Cistanche tubulosa.It displayed unprecedented mono-and/or di-malonylation activity toward diverse glucosides with different aglycons.A“one-pot”system by CtMaT1 and a malonyl-CoA synthetase was established to biosynthesize nine new malonylated glucosides.Structural investigations revealed that CtMaT1 possesses an adequately spacious acyl-acceptor pocket capable of accommodating diverse glucosides.Additionally,it recognizes malonyl-CoA through strong electrotactic and hydrogen interactions.QM/MM calculation revealed the H167-mediated SN2 reaction mechanism of CtMaT1,while dynamic simulations detected the formation of stable hydrogen bonds between the glucose-6-OH group and H167,resulting in its high malonylation regiospecificity.Calculated energy profiles of two isomeric glycosides highlighted lower reaction energy barriers towards glucoside substrates,emphasizing CtMaT1's preference for glucosides.Furthermore,a mutant CtMaT1H36A with notably increased di-malonylation activity was obtained.The underlying molecular mechanism was illuminated through MM/GBSA binding free energy calculation.This study significantly advances the understanding of plant acyltransferases from both functional and protein structural perspectives,while also providing a versatile tool for enzymatic malonylation applications in pharmacology.
Xiao LiuYuyu LiuXiping XuWenqian HuangYaru YanYingxia WangWeisheng TianTing MoXiaoxue CuiJun LiShe-Po ShiPengfei Tu
Expanding catalytic promiscuity of a bifunctional terpene synthase through a single mutation-induced change in hydrogen-bond network within the catalytic pocket
2024年
Fungal bifunctional terpene synthases(BFTSs)catalyze the formation of numerous di-/sester-/tri-terpenes skeletons.However,the mechanism in controlling the cyclization pattern of terpene scaffolds is rarely deciphered for further application of tuning the catalytic promiscuity of terpene synthases for expanding the chemical space.In this study,we expanded the catalytic promiscuity of Fusarium oxysporum fusoxypene synthase(FoFS)by a single mutation at L89,leading to the production of three new sesterterpenes.Further computational analysis revealed that the reconstitution of the hydrogen-bond(H-bond)network of second-shell residues around the active site of FoFS influences the orientation of the aromatic residue W69 within the first-shell catalytic pocket.Thus,the dynamic orientation of W69 alters the carbocation transport,leading to the production of diverse ring system skeletons.These findings enhance our knowledge on understanding the molecular mechanisms,which could be applied on protein engineering terpene synthases on regulating the terpene skeletons.
Xinye WangYiyi HuangWeiyan ZhangKangjie LvXiaoying LiZhixin WangLi ZhangTom HsiangLixin ZhangLiming OuyangXueting Liu
催化混杂性驱动的酶功能重塑被引量:1
2023年
作为生物催化剂,酶蛋白介导的生化反应具有条件温和、绿色环保等优点。然而相比化学催化剂,天然酶功能的局限性制约了它在生物制造领域的广泛应用。前期研究表明,酶蛋白除了催化专一性外,同时还展现出混杂性的一面,可在特定条件下催化非天然模式反应。这一特性为酶分子功能重塑提供了新思路,可用来指导人工酶设计,拓展天然酶的催化边界,实现新颖酶促反应类型,以扩大酶催化应用场景。本文从酶催化功能混杂性背后可能的进化机制入手,综述了当前诱导酶催化功能混杂性的常用策略,如定向进化、构象动力学、反应条件诱导及祖先酶重构等技术,并从催化机制、构效关系及适应性进化等多个角度,结合近年来相关研究实例,探讨了催化功能混杂性背后的分子机制,为突破天然酶促反应局限性、创制催化非天然反应的高效人工酶元件提供参考。
曲戈孙周通
关键词:定向进化酶工程生物催化
紫金牛中一个新颖底物杂泛性O-甲基转移酶
2023年
O-甲基转移酶(O-methyltransferases,OMTs)是许多天然产物生物合成途径中的关键后修饰酶之一,O-甲基化不仅可降低化合物的化学反应活性,而且能显著改善其溶解性、稳定性等理化性质和生物活性等。本研究根据紫金牛转录组测序结果,首次从紫金牛中克隆获得1条OMT基因(命名为AjOMT1),并成功进行了大肠杆菌异源表达,体外酶催化活性结果表明重组AjOMT1能高效催化槲皮素发生O-甲基化反应。底物谱考察结果表明,AjOMT1能催化黄酮类、茋类、香豆素类、生物碱类、苯丙素类等不同结构类型的化合物进行甲基化反应,具有非常宽泛的底物谱;AjOMT1偏好于具邻二酚羟基的化合物,并表现出位置选择性。本研究结果表明,AjOMT1可用作O-甲基化工具酶实现不同类型化合物的O-甲基化、获取多样化的活性甲基化产物,可为药物发现提供新方法,并可为天然产物合成生物学研究提供普适性元件。
刘琦闫锐琪谢冰寒隋颂扬解可波戴均贵杨林
关键词:紫金牛
非核糖体肽Skyllamycin B生物合成中Ⅰ型硫酯酶底物杂泛性的初步研究被引量:1
2021年
【背景】Skyllamycins是一类从链霉菌中发现的具有血小板生长因子抑制和生物膜抑制作用的非核糖体肽类,其环肽环合反应是由非核糖体肽合成酶中的硫酯酶功能域催化完成。【目的】克隆和表达Skyllamycin非核糖体肽合成酶最后一个模块中的硫酯酶(Skyxy-TE)基因,合成Skyxy-TE底物类似物,通过体外催化实验表征Skyxy-TE的底物杂泛性。【方法】采用Ligation Independent Cloning(LIC)方法,从一株含有Skyllamycin B生物合成基因簇的链霉菌Streptomycessp.PKU-MA01239中克隆和表达skyxy-TE,通过镍离子柱亲和层析纯化Skyxy-TE。运用固相多肽合成法合成2个底物类似物1和2,进行Skyxy-TE的体外催化实验。【结果】通过对Skyxy-TE的表达纯化,获得了纯度较好的可溶性蛋白;通过固相多肽合成,得到了能够模拟Skyllamycin B底物类似物的化合物1和2,硫酯酶蛋白体外催化化合物1和2得到了化合物3和4,化合物3和4通过核磁共振和高分辨质谱确认为环肽。【结论】Skyllamycin B生物合成中Skyxy-TE表现出一定的底物杂泛性,可以识别底物类似物催化环化反应,该研究为将来利用化学-酶联法制备更多环肽类似物提供了依据。
宋娟于佳慧李安南关梦铁耿彤彤张中义杨东辉马明
SERIneALanine Killer:SPT promiscuity inhibits tumour growth via intra-tumoral deoxysphingolipid production
2020年
In a recent article in Nature,Muthusami et al.1 highlight the promiscuity of serine palmitoyltransferase(SPT)for non-essential amino acids under low serine conditions,illustrating a previously unappreciated mechanism for inhibition of tumour growth—increased levels of deoxysphingolipids.
Mattia FalconeOliver D.K.Maddocks
关键词:KILLERSPTTUMOUR
Application of Enzymatic Promiscuity in Pharmaceutical Synthesis:Papain-catalyzed One-pot Synthesis of 1,4-Dihydropyridine Calcium Channel Antagonists and Derivatives被引量:2
2019年
A new method for the synthesis of 1,4-dihydropyridine(1,4-DHP)calcium channel antagonists felodipme, nitrendipine and their derivatives via papain-catalyzed three-component reactions of aldehyde,methyl acetoacetate and ethyl 3-aminocrotonate was developed.Operational simplicity,mild reaction conditions and eco-friendliness are the key features of this protocol.
JIANG LingYE WentingSU WeikeYU Chuanming
关键词:PAPAINPROMISCUITY1,4-DIHYDROPYRIDINEANTAGONIST
酶催化功能混杂性研究进展
2018年
酶催化生物体内化学反应,是生命代谢形成运转的动力。与传统观点认为酶具有专一性催化功能相对,近年来生物信息与实验分析都证实了酶具有多种混杂催化功能是普遍存在的现象。在过去的几十亿年里,古老酶一直不断演化以适应变化的环境,形成现代功能多样的酶蛋白家族。基于独特底物结合模式和动态蛋白结构的催化功能混杂性是酶蛋白适应性演化的基础。酶的混杂活性有望被开发应用于药物酶法合成及环境修复领域。本文就酶催化功能混杂性的普遍性、分子机理、可进化性等方面的相关研究进展进行综述。
杨键龙丽娟
关键词:混杂性分子进化环境适应
海洋芽孢杆菌大环内酯糖基转移酶BmmGT1糖基受体广谱性探究
2017年
目的对海洋芽孢杆菌B-9987中糖基转移酶BmmGT1糖基受体的广谱性进行探究。方法以UDPD-葡萄糖为糖基供体,与不同糖基受体进行体外酶促反应,通过高效液相色谱(HPLC)检测反应产物,并采用高分辨质谱(HRMS)手段对糖基化产物进行初步鉴定。结果糖基转移酶BmmGT1能够以UDP-D-葡萄糖为糖基供体,识别两性霉素B以及氯霉素,分别生成两性霉素B双糖基化和单糖基化衍生物以及氯霉素单糖基化衍生物,得到3个糖基化产物。结论糖基转移酶BmmGT1对糖基受体的选择有灵活性,可作为潜在的工具酶用于化合物结构多样性研究。
刘权权刘增智刘扬秦文任鹏飞李花月李文利
关键词:糖基转移酶
唐“宫闱不肃”与《孝经》“闺门”章的存留——以唐皇室血统与文统为中心
2017年
今古文《孝经》,文字虽小异,分章稍有不同,但以"闺门"章之存留的差异为最大。唐玄宗御注《孝经》弃古文《孝经》"闺门"一章,引发了一场巨大的争论。元代的熊禾认为司马贞删"闺门"章开启了唐玄宗帷薄不修之风,明代孙本认为司马贞删"闺门"章是为了避国讳,《四库》馆臣认为李唐皇室闺门之中德行有缺世所共知,"闺门"章之去留实与避唐国讳毫不相干。李唐先世出自关陇集团,其后裔多与胡族通婚,又因"关中本位政策"之影响长期受到胡族文化之熏染;而玄宗在御注《孝经》时对"闺门"章所提倡的亲亲、尊尊、夫妇有别、父子有序之思想有异议,致使其弃古文不用。
肖淼
关键词:《孝经》血统文统

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赵伟光
作品数:1被引量:1H指数:1
供职机构:济宁市技师学院
研究主题:RAW PF PACKET 网络流量监测 PROMISCUITY